WormMine: Gene WBGene00196069

• WormBase Gene ID: WBGene00196069
• Gene Name: Y39A3CL.8
• Sequence Name: Y39A3CL.8
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in SIBDL based on single-cell RNA-seq studies. Is affected by mett-10 and ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 291

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00196069

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y39A3CL.8	Y39A3CL.8	291	III: 1795738-1796028

Other

0 CDSs

0 RNAi Result

10 Allele

• gk962532
• gk964281
• gkDf40
• tm10797
• gk167431
• WBVar02014865
• WBVar00042253
• WBVar01918304
• WBVar00042258
• WBVar01258252

1 Chromosome

• WormBase ID: III
• Organism: Caenorhabditis elegans
• Length (nt): 13783801

1 Chromosome Location

• Feature . Primary Identifier: WBGene00196069
• Start: 1795738
• End: 1796028
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron
	Single-cell RNA-Seq cell group 22_0 expressed in neuron.	scVI 0.6.0	WBPaper00065841:22_0
	Transcripts that showed significantly increased expression in VC1743[mett-10(ok2204)] comparing to in N2 when animals grow on peptone-rich (NA22) plates.	DESeq2, p-value < 0.05, fold change > 2.	WBPaper00061357:mett-10(ok2204)_upregulated_NA22

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00196069
• Start: 1795738
• End: 1796028
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 291

1 Sequence Ontology Term