WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CL.1b.1 Sequence Name  Y39A3CL.1b.1
Length (nt)  1942   Chromosome Location  III: 1834515-1846758
Chromosome . Primary Identifier  III Chromosome Location . Start  1834515
Chromosome Location . End  1846758 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021440 rexd-1 Y39A3CL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CL.1b Y39A3CL.1b 1812   III: 1834520-1834606

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3CL.1b.1 1834515 1846758 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80267   92   III: 1834515-1834606 Caenorhabditis elegans
Exon80269   74   III: 1836133-1836206 Caenorhabditis elegans
Exon80271   103   III: 1836264-1836366 Caenorhabditis elegans
Exon80273   142   III: 1837119-1837260 Caenorhabditis elegans
Exon80275   369   III: 1838346-1838714 Caenorhabditis elegans
Exon80277   113   III: 1838776-1838888 Caenorhabditis elegans
Exon80279   329   III: 1840169-1840497 Caenorhabditis elegans
Exon80281   157   III: 1841754-1841910 Caenorhabditis elegans
Exon80284   151   III: 1844373-1844523 Caenorhabditis elegans
Exon80285   412   III: 1846347-1846758 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3CL.1b.1 1834515 1846758 1

1 Sequence

Length
1942

1 Sequence Ontology Term

Identifier Name Description
transcript