WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A3CR.3b Sequence Name  Y39A3CR.3b
Length (nt)  1728   Chromosome Location  III: 1870307-1870338
Chromosome . Primary Identifier  III Chromosome Location . Start  1870307
Chromosome Location . End  1870338
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CR.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46425 TTC-7, isoform b 62.7 575 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056152
WBRNAi00020361

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A3CR.3b 1870307 1870338 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021444 ttc-7 Y39A3CR.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A3CR.3b 1870307 1870338 1
CDS:Y39A3CR.3b 1870393 1870709 1
CDS:Y39A3CR.3b 1871710 1871809 1
CDS:Y39A3CR.3b 1871919 1872277 1
CDS:Y39A3CR.3b 1873718 1874029 1
CDS:Y39A3CR.3b 1874526 1874761 1
CDS:Y39A3CR.3b 1875983 1876170 1
CDS:Y39A3CR.3b 1876817 1877000 1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A3CR.3b.1 Y39A3CR.3b.1 1728   III: 1870307-1877000