WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53A3.3b.1 Sequence Name  F53A3.3b.1
Length (nt)  640   Chromosome Location  III: 1950660-1951424
Chromosome . Primary Identifier  III Chromosome Location . Start  1950660
Chromosome Location . End  1951424 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004491 rps-15A F53A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A3.3b F53A3.3b 306   III: 1950988-1950996

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53A3.3b.1 1950660 1951424 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80462   112   III: 1950660-1950771 Caenorhabditis elegans
Exon80464   176   III: 1950821-1950996 Caenorhabditis elegans
Exon80468   352   III: 1951073-1951424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53A3.3b.1 1950660 1951424 1

1 Sequence

Length
640

1 Sequence Ontology Term

Identifier Name Description
transcript