WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R155.3.1 Sequence Name  R155.3.1
Length (nt)  4014   Chromosome Location  III: 1971182-1976742
Chromosome . Primary Identifier  III Chromosome Location . Start  1971182
Chromosome Location . End  1976742 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R155.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020117 R155.3 R155.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R155.3 R155.3 3498   III: 1971232-1971582

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R155.3.1 1971182 1976742 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80511   401   III: 1971182-1971582 Caenorhabditis elegans
Exon80512   155   III: 1971631-1971785 Caenorhabditis elegans
Exon80513   170   III: 1971911-1972080 Caenorhabditis elegans
Exon80514   384   III: 1972130-1972513 Caenorhabditis elegans
Exon80515   217   III: 1972562-1972778 Caenorhabditis elegans
Exon80516   236   III: 1973247-1973482 Caenorhabditis elegans
Exon80517   2268   III: 1973530-1975797 Caenorhabditis elegans
Exon80518   127   III: 1976513-1976639 Caenorhabditis elegans
Exon80519   56   III: 1976687-1976742 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R155.3.1 1971182 1976742 -1

1 Sequence

Length
4014

1 Sequence Ontology Term

Identifier Name Description
transcript