WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3B.8.1 Sequence Name  Y39A3B.8.1
Length (nt)  290   Chromosome Location  III: 1987993-1988454
Chromosome . Primary Identifier  III Chromosome Location . Start  1987993
Chromosome Location . End  1988454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3B.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00306005 Y39A3B.8 Y39A3B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3B.8 Y39A3B.8 219   III: 1988015-1988082

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3B.8.1 1987993 1988454 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80537   90   III: 1987993-1988082 Caenorhabditis elegans
Exon80538   200   III: 1988255-1988454 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3B.8.1 1987993 1988454 1

1 Sequence

Length
290

1 Sequence Ontology Term

Identifier Name Description
transcript