WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E10.2a.1 Sequence Name  M01E10.2a.1
Length (nt)  4342   Chromosome Location  III: 2034988-2048007
Chromosome . Primary Identifier  III Chromosome Location . Start  2034988
Chromosome Location . End  2048007 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001063 dpy-1 M01E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E10.2a M01E10.2a 4284   III: 2035036-2035134

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E10.2a.1 2034988 2048007 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80641   147   III: 2034988-2035134 Caenorhabditis elegans
Exon80643   80   III: 2036007-2036086 Caenorhabditis elegans
Exon80645   144   III: 2036134-2036277 Caenorhabditis elegans
Exon80647   79   III: 2036551-2036629 Caenorhabditis elegans
Exon80649   75   III: 2036679-2036753 Caenorhabditis elegans
Exon80651   153   III: 2036829-2036981 Caenorhabditis elegans
Exon80653   405   III: 2037880-2038284 Caenorhabditis elegans
Exon80655   492   III: 2039033-2039524 Caenorhabditis elegans
Exon80657   63   III: 2040291-2040353 Caenorhabditis elegans
Exon80659   342   III: 2040621-2040962 Caenorhabditis elegans
Exon80661   473   III: 2041636-2042108 Caenorhabditis elegans
Exon80663   173   III: 2042320-2042492 Caenorhabditis elegans
Exon80665   230   III: 2042541-2042770 Caenorhabditis elegans
Exon80667   432   III: 2042819-2043250 Caenorhabditis elegans
Exon80669   285   III: 2043686-2043970 Caenorhabditis elegans
Exon80672   219   III: 2044881-2045099 Caenorhabditis elegans
Exon80673   75   III: 2045201-2045275 Caenorhabditis elegans
Exon80674   93   III: 2045934-2046026 Caenorhabditis elegans
Exon80675   309   III: 2046933-2047241 Caenorhabditis elegans
Exon80676   73   III: 2047935-2048007 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E10.2a.1 2034988 2048007 -1

1 Sequence

Length
4342

1 Sequence Ontology Term

Identifier Name Description
transcript