WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E10.2b.1 Sequence Name  M01E10.2b.1
Length (nt)  3324   Chromosome Location  III: 2034997-2045033
Chromosome . Primary Identifier  III Chromosome Location . Start  2034997
Chromosome Location . End  2045033 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001063 dpy-1 M01E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E10.2b M01E10.2b 3285   III: 2035036-2035134

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E10.2b.1 2034997 2045033 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80642   138   III: 2034997-2035134 Caenorhabditis elegans
Exon80644   80   III: 2036007-2036086 Caenorhabditis elegans
Exon80646   144   III: 2036134-2036277 Caenorhabditis elegans
Exon80648   79   III: 2036551-2036629 Caenorhabditis elegans
Exon80650   75   III: 2036679-2036753 Caenorhabditis elegans
Exon80652   153   III: 2036829-2036981 Caenorhabditis elegans
Exon80654   405   III: 2037880-2038284 Caenorhabditis elegans
Exon80656   492   III: 2039033-2039524 Caenorhabditis elegans
Exon80658   63   III: 2040291-2040353 Caenorhabditis elegans
Exon80660   342   III: 2040621-2040962 Caenorhabditis elegans
Exon80662   80   III: 2042029-2042108 Caenorhabditis elegans
Exon80664   173   III: 2042320-2042492 Caenorhabditis elegans
Exon80666   230   III: 2042541-2042770 Caenorhabditis elegans
Exon80668   432   III: 2042819-2043250 Caenorhabditis elegans
Exon80670   285   III: 2043686-2043970 Caenorhabditis elegans
Exon80671   153   III: 2044881-2045033 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E10.2b.1 2034997 2045033 -1

1 Sequence

Length
3324

1 Sequence Ontology Term

Identifier Name Description
transcript