WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G9A.9a.1 Sequence Name  Y48G9A.9a.1
Length (nt)  1360   Chromosome Location  III: 2092709-2099881
Chromosome . Primary Identifier  III Chromosome Location . Start  2092709
Chromosome Location . End  2099881 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021702 Y48G9A.9 Y48G9A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G9A.9a Y48G9A.9a 1059   III: 2092763-2092805

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.9a.1 2092709 2099881 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80724   97   III: 2092709-2092805 Caenorhabditis elegans
Exon80725   65   III: 2092867-2092931 Caenorhabditis elegans
Exon80727   172   III: 2095985-2096156 Caenorhabditis elegans
Exon80729   202   III: 2097112-2097313 Caenorhabditis elegans
Exon80731   216   III: 2098051-2098266 Caenorhabditis elegans
Exon80733   184   III: 2098505-2098688 Caenorhabditis elegans
Exon80736   424   III: 2099458-2099881 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.9a.1 2092709 2099881 1

1 Sequence

Length
1360

1 Sequence Ontology Term

Identifier Name Description
transcript