WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G9A.7a.1 Sequence Name  Y48G9A.7a.1
Length (nt)  310   Chromosome Location  III: 2111802-2112468
Chromosome . Primary Identifier  III Chromosome Location . Start  2111802
Chromosome Location . End  2112468 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021701 Y48G9A.7 Y48G9A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G9A.7a Y48G9A.7a 231   III: 2111813-2111960

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.7a.1 2111802 2112468 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80745   159   III: 2111802-2111960 Caenorhabditis elegans
Exon80746   151   III: 2112318-2112468 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.7a.1 2111802 2112468 1

1 Sequence

Length
310

1 Sequence Ontology Term

Identifier Name Description
transcript