WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G9A.11 Sequence Name  Y48G9A.11
Length (nt)  1056   Chromosome Location  III: 2112494-2112553
Chromosome . Primary Identifier  III Chromosome Location . Start  2112494
Chromosome Location . End  2112553
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42196 Y48G9A.11 40.8 351 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056979
WBRNAi00021270
WBRNAi00076800

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G9A.11 2112494 2112553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021704 Y48G9A.11 Y48G9A.11 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G9A.11 2112494 2112553 -1
CDS:Y48G9A.11 2113088 2113212 -1
CDS:Y48G9A.11 2114787 2114932 -1
CDS:Y48G9A.11 2115103 2115231 -1
CDS:Y48G9A.11 2115908 2115990 -1
CDS:Y48G9A.11 2116201 2116348 -1
CDS:Y48G9A.11 2116402 2116499 -1
CDS:Y48G9A.11 2116566 2116754 -1
CDS:Y48G9A.11 2116806 2116883 -1

1 Sequence

Length
1056

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G9A.11.1 Y48G9A.11.1 1148   III: 2112416-2116897