WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C39B5.12 Sequence Name  C39B5.12
Length (nt)  978   Chromosome Location  III: 2222483-2222670
Chromosome . Primary Identifier  III Chromosome Location . Start  2222483
Chromosome Location . End  2222670
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39B5.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24838 SRD-65 37.4 325 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00042187
WBRNAi00029673

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C39B5.12 2222483 2222670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005142 srd-65 C39B5.12 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C39B5.12 2222483 2222670 -1
CDS:C39B5.12 2222719 2222797 -1
CDS:C39B5.12 2222840 2223118 -1
CDS:C39B5.12 2223163 2223303 -1
CDS:C39B5.12 2223357 2223453 -1
CDS:C39B5.12 2223807 2224000 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C39B5.12.1 C39B5.12.1 1055   III: 2222438-2224032