WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39B5.2.1 Sequence Name  C39B5.2.1
Length (nt)  1212   Chromosome Location  III: 2234884-2236987
Chromosome . Primary Identifier  III Chromosome Location . Start  2234884
Chromosome Location . End  2236987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39B5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016520 C39B5.2 C39B5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39B5.2 C39B5.2 1137   III: 2234885-2235204

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39B5.2.1 2234884 2236987 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80890   321   III: 2234884-2235204 Caenorhabditis elegans
Exon80892   660   III: 2235733-2236392 Caenorhabditis elegans
Exon80893   231   III: 2236757-2236987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39B5.2.1 2234884 2236987 1

1 Sequence

Length
1212

1 Sequence Ontology Term

Identifier Name Description
transcript