Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y54F10BM.22.1 | Y54F10BM.22.1 |
393
 |
III: 2280899-2281792 |
Other
1 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:Y54F10BM.22 | Y54F10BM.22 |
300
|
III: 2280921-2281084 |
29 Allele
| Public Name |
|---|
| gk962532 |
| gk964281 |
| WBVar02122456 |
| WBVar01540820 |
| gk619071 |
| gk810769 |
| gk730809 |
| gk599724 |
| gk399689 |
| WBVar01444282 |
| WBVar01401337 |
| WBVar00046413 |
| WBVar02102293 |
| WBVar00027966 |
| gk168402 |
| WBVar01793390 |
| WBVar01708968 |
| WBVar01708967 |
| WBVar01708970 |
| WBVar01708969 |
| WBVar01708971 |
| WBVar01259170 |
| WBVar01708960 |
| WBVar01708962 |
| WBVar01708961 |
| WBVar01708964 |
| WBVar01708963 |
| WBVar01708966 |
| WBVar01708965 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00306013 | 2280899 | 2281792 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIII_2281793..2282024 | 232 | III: 2281793-2282024 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly decreased expression in ash-2(RNAi) comparing to in wild type animals injected with vector. | Differential mRNA expression using DESeq2. mRNAs with a FDR < 0.05 and fold change > 2 considered differentially expressed. | WBPaper00066232:ash-2(RNAi)_downregulated_WT | |
| Transcripts that showed significantly increased expression in hsf-1(RNAi) comparing to in ash-2 animals injected with vector. | Differential mRNA expression using DESeq2. mRNAs with a FDR < 0.05 and fold change > 2 considered differentially expressed. | WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2 | |
| Fungi: Myzocytiopsis humicola extract | Transcripts that showed significantly increased expression in old-1(ok1273) L4 larva animals after 4 hours of exposure to oomycete Myzocytiopsis humicola extract. | Differentially expressed genes as determined by Kallisto and Sleuth (pval < 0.01, qval < 0.1, fold change > 2). | WBPaper00065995:M.humicola-extract_upregulated_old-1(ok1273) |