WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54F10BM.15.1 Sequence Name  Y54F10BM.15.1
Length (nt)  982   Chromosome Location  III: 2291415-2294191
Chromosome . Primary Identifier  III Chromosome Location . Start  2291415
Chromosome Location . End  2294191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10BM.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044403 fbxa-219 Y54F10BM.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54F10BM.15 Y54F10BM.15 876   III: 2291454-2291539

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10BM.15.1 2291415 2294191 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80976   125   III: 2291415-2291539 Caenorhabditis elegans
Exon80977   613   III: 2292346-2292958 Caenorhabditis elegans
Exon80978   244   III: 2293948-2294191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10BM.15.1 2291415 2294191 1

1 Sequence

Length
982

1 Sequence Ontology Term

Identifier Name Description
transcript