WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04J21.3a.1 Sequence Name  H04J21.3a.1
Length (nt)  2823   Chromosome Location  III: 2347591-2362056
Chromosome . Primary Identifier  III Chromosome Location . Start  2347591
Chromosome Location . End  2362056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04J21.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001589 gip-1 H04J21.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04J21.3a H04J21.3a 2676   III: 2347595-2347667

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04J21.3a.1 2347591 2362056 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81050   77   III: 2347591-2347667 Caenorhabditis elegans
Exon81051   93   III: 2348637-2348729 Caenorhabditis elegans
Exon81053   258   III: 2348779-2349036 Caenorhabditis elegans
Exon81055   205   III: 2350247-2350451 Caenorhabditis elegans
Exon81057   254   III: 2352182-2352435 Caenorhabditis elegans
Exon81059   119   III: 2353539-2353657 Caenorhabditis elegans
Exon81062   251   III: 2355292-2355542 Caenorhabditis elegans
Exon81065   172   III: 2356455-2356626 Caenorhabditis elegans
Exon81067   84   III: 2356685-2356768 Caenorhabditis elegans
Exon81069   284   III: 2358581-2358864 Caenorhabditis elegans
Exon81071   163   III: 2359586-2359748 Caenorhabditis elegans
Exon81073   100   III: 2360363-2360462 Caenorhabditis elegans
Exon81075   548   III: 2360528-2361075 Caenorhabditis elegans
Exon81077   215   III: 2361842-2362056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04J21.3a.1 2347591 2362056 1

1 Sequence

Length
2823

1 Sequence Ontology Term

Identifier Name Description
transcript