WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04B5.4.1 Sequence Name  W04B5.4.1
Length (nt)  747   Chromosome Location  III: 2406310-2410975
Chromosome . Primary Identifier  III Chromosome Location . Start  2406310
Chromosome Location . End  2410975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04B5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021021 mrpl-30 W04B5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04B5.4 W04B5.4 594   III: 2406451-2406558

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04B5.4.1 2406310 2410975 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81153   249   III: 2406310-2406558 Caenorhabditis elegans
Exon81154   222   III: 2407302-2407523 Caenorhabditis elegans
Exon81155   111   III: 2408880-2408990 Caenorhabditis elegans
Exon81156   134   III: 2409691-2409824 Caenorhabditis elegans
Exon81157   31   III: 2410945-2410975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04B5.4.1 2406310 2410975 -1

1 Sequence

Length
747

1 Sequence Ontology Term

Identifier Name Description
transcript