WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H9.8a.1 Sequence Name  E02H9.8a.1
Length (nt)  1441   Chromosome Location  III: 2449499-2454805
Chromosome . Primary Identifier  III Chromosome Location . Start  2449499
Chromosome Location . End  2454805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H9.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003711 nhr-121 E02H9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H9.8a E02H9.8a 1386   III: 2449533-2449649

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E02H9.8a.1 2449499 2454805 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81248   151   III: 2449499-2449649 Caenorhabditis elegans
Exon81249   158   III: 2449702-2449859 Caenorhabditis elegans
Exon81251   119   III: 2449913-2450031 Caenorhabditis elegans
Exon81253   99   III: 2450390-2450488 Caenorhabditis elegans
Exon81255   215   III: 2450957-2451171 Caenorhabditis elegans
Exon81257   133   III: 2451565-2451697 Caenorhabditis elegans
Exon81259   279   III: 2452469-2452747 Caenorhabditis elegans
Exon81261   61   III: 2453462-2453522 Caenorhabditis elegans
Exon81263   65   III: 2453603-2453667 Caenorhabditis elegans
Exon81265   124   III: 2453735-2453858 Caenorhabditis elegans
Exon81267   37   III: 2454769-2454805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E02H9.8a.1 2449499 2454805 -1

1 Sequence

Length
1441

1 Sequence Ontology Term

Identifier Name Description
transcript