WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54F10AM.5.1 Sequence Name  Y54F10AM.5.1
Length (nt)  714   Chromosome Location  III: 2529063-2530502
Chromosome . Primary Identifier  III Chromosome Location . Start  2529063
Chromosome Location . End  2530502 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10AM.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021849 ndua-8 Y54F10AM.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54F10AM.5 Y54F10AM.5 552   III: 2529076-2529207

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.5.1 2529063 2530502 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81406   145   III: 2529063-2529207 Caenorhabditis elegans
Exon81407   176   III: 2529254-2529429 Caenorhabditis elegans
Exon81408   119   III: 2529539-2529657 Caenorhabditis elegans
Exon81409   274   III: 2530229-2530502 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.5.1 2529063 2530502 1

1 Sequence

Length
714

1 Sequence Ontology Term

Identifier Name Description
transcript