WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54F10AM.4.1 Sequence Name  Y54F10AM.4.1
Length (nt)  4213   Chromosome Location  III: 2530620-2543068
Chromosome . Primary Identifier  III Chromosome Location . Start  2530620
Chromosome Location . End  2543068 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10AM.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54F10AM.4 Y54F10AM.4 3822   III: 2530620-2530670

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.4.1 2530620 2543068 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81447   51   III: 2530620-2530670 Caenorhabditis elegans
Exon81452   111   III: 2530714-2530824 Caenorhabditis elegans
Exon81455   127   III: 2533823-2533949 Caenorhabditis elegans
Exon81458   200   III: 2536399-2536598 Caenorhabditis elegans
Exon81461   261   III: 2537186-2537446 Caenorhabditis elegans
Exon81464   308   III: 2538493-2538800 Caenorhabditis elegans
Exon81467   164   III: 2539300-2539463 Caenorhabditis elegans
Exon81468   131   III: 2539676-2539806 Caenorhabditis elegans
Exon81469   546   III: 2539863-2540408 Caenorhabditis elegans
Exon81470   984   III: 2540470-2541453 Caenorhabditis elegans
Exon81471   1330   III: 2541739-2543068 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.4.1 2530620 2543068 1

1 Sequence

Length
4213

1 Sequence Ontology Term

Identifier Name Description
transcript