WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2B.8.1 Sequence Name  Y71H2B.8.1
Length (nt)  1913   Chromosome Location  III: 2579293-2583107
Chromosome . Primary Identifier  III Chromosome Location . Start  2579293
Chromosome Location . End  2583107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2B.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022197 Y71H2B.8 Y71H2B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2B.8 Y71H2B.8 891   III: 2579314-2579456

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2B.8.1 2579293 2583107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81530   164   III: 2579293-2579456 Caenorhabditis elegans
Exon81531   76   III: 2579687-2579762 Caenorhabditis elegans
Exon81532   132   III: 2579849-2579980 Caenorhabditis elegans
Exon81533   92   III: 2580182-2580273 Caenorhabditis elegans
Exon81534   93   III: 2580318-2580410 Caenorhabditis elegans
Exon81535   145   III: 2580496-2580640 Caenorhabditis elegans
Exon81536   1211   III: 2581897-2583107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2B.8.1 2579293 2583107 1

1 Sequence

Length
1913

1 Sequence Ontology Term

Identifier Name Description
transcript