WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2B.7.1 Sequence Name  Y71H2B.7.1
Length (nt)  1329   Chromosome Location  III: 2586555-2589313
Chromosome . Primary Identifier  III Chromosome Location . Start  2586555
Chromosome Location . End  2589313 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2B.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022196 gpa-17 Y71H2B.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2B.7 Y71H2B.7 1221   III: 2586591-2586674

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2B.7.1 2586555 2589313 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81540   120   III: 2586555-2586674 Caenorhabditis elegans
Exon81541   108   III: 2587500-2587607 Caenorhabditis elegans
Exon81542   415   III: 2587679-2588093 Caenorhabditis elegans
Exon81543   101   III: 2588248-2588348 Caenorhabditis elegans
Exon81544   147   III: 2588395-2588541 Caenorhabditis elegans
Exon81545   438   III: 2588876-2589313 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2B.7.1 2586555 2589313 1

1 Sequence

Length
1329

1 Sequence Ontology Term

Identifier Name Description
transcript