WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2B.5.1 Sequence Name  Y71H2B.5.1
Length (nt)  3023   Chromosome Location  III: 2608017-2618866
Chromosome . Primary Identifier  III Chromosome Location . Start  2608017
Chromosome Location . End  2618866 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2B.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022195 Y71H2B.5 Y71H2B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2B.5 Y71H2B.5 2874   III: 2608019-2608196

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2B.5.1 2608017 2618866 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81573   180   III: 2608017-2608196 Caenorhabditis elegans
Exon81574   408   III: 2609090-2609497 Caenorhabditis elegans
Exon81575   314   III: 2610686-2610999 Caenorhabditis elegans
Exon81576   600   III: 2613170-2613769 Caenorhabditis elegans
Exon81577   651   III: 2614599-2615249 Caenorhabditis elegans
Exon81578   101   III: 2616409-2616509 Caenorhabditis elegans
Exon81579   330   III: 2616924-2617253 Caenorhabditis elegans
Exon81580   77   III: 2618083-2618159 Caenorhabditis elegans
Exon81581   146   III: 2618213-2618358 Caenorhabditis elegans
Exon81582   216   III: 2618651-2618866 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2B.5.1 2608017 2618866 1

1 Sequence

Length
3023

1 Sequence Ontology Term

Identifier Name Description
transcript