WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H19M22.3a.1 Sequence Name  H19M22.3a.1
Length (nt)  2344   Chromosome Location  III: 2636409-2642864
Chromosome . Primary Identifier  III Chromosome Location . Start  2636409
Chromosome Location . End  2642864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H19M22.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019212 zmp-2 H19M22.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H19M22.3a H19M22.3a 1560   III: 2636587-2636763

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H19M22.3a.1 2636409 2642864 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81597   355   III: 2636409-2636763 Caenorhabditis elegans
Exon81599   84   III: 2638592-2638675 Caenorhabditis elegans
Exon81601   121   III: 2638726-2638846 Caenorhabditis elegans
Exon81604   257   III: 2639801-2640057 Caenorhabditis elegans
Exon81607   403   III: 2640277-2640679 Caenorhabditis elegans
Exon81612   153   III: 2640739-2640891 Caenorhabditis elegans
Exon81613   108   III: 2640949-2641056 Caenorhabditis elegans
Exon81616   198   III: 2641483-2641680 Caenorhabditis elegans
Exon81622   665   III: 2642200-2642864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H19M22.3a.1 2636409 2642864 1

1 Sequence

Length
2344

1 Sequence Ontology Term

Identifier Name Description
transcript