WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H19M22.2d.1 Sequence Name  H19M22.2d.1
Length (nt)  2876   Chromosome Location  III: 2658096-2665380
Chromosome . Primary Identifier  III Chromosome Location . Start  2658096
Chromosome Location . End  2665380 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H19M22.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002915 let-805 H19M22.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H19M22.2d H19M22.2d 2727   III: 2658096-2658186

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H19M22.2d.1 2658096 2665380 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81638   91   III: 2658096-2658186 Caenorhabditis elegans
Exon81641   69   III: 2658819-2658887 Caenorhabditis elegans
Exon81644   255   III: 2659030-2659284 Caenorhabditis elegans
Exon81647   389   III: 2659335-2659723 Caenorhabditis elegans
Exon81650   811   III: 2660404-2661214 Caenorhabditis elegans
Exon81653   63   III: 2662685-2662747 Caenorhabditis elegans
Exon81656   103   III: 2662806-2662908 Caenorhabditis elegans
Exon81659   148   III: 2662957-2663104 Caenorhabditis elegans
Exon81662   73   III: 2663153-2663225 Caenorhabditis elegans
Exon81665   327   III: 2663285-2663611 Caenorhabditis elegans
Exon81668   209   III: 2663656-2663864 Caenorhabditis elegans
Exon81671   73   III: 2664953-2665025 Caenorhabditis elegans
Exon81674   265   III: 2665116-2665380 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H19M22.2d.1 2658096 2665380 1

1 Sequence

Length
2876

1 Sequence Ontology Term

Identifier Name Description
transcript