WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H19M22.2a.1 Sequence Name  H19M22.2a.1
Length (nt)  13244   Chromosome Location  III: 2658083-2681111
Chromosome . Primary Identifier  III Chromosome Location . Start  2658083
Chromosome Location . End  2681111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H19M22.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002915 let-805 H19M22.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H19M22.2a H19M22.2a 12843   III: 2658096-2658186

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H19M22.2a.1 2658083 2681111 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81667   104   III: 2658083-2658186 Caenorhabditis elegans
Exon81669   69   III: 2658819-2658887 Caenorhabditis elegans
Exon81672   255   III: 2659030-2659284 Caenorhabditis elegans
Exon81675   389   III: 2659335-2659723 Caenorhabditis elegans
Exon81678   811   III: 2660404-2661214 Caenorhabditis elegans
Exon81681   63   III: 2662685-2662747 Caenorhabditis elegans
Exon81684   103   III: 2662806-2662908 Caenorhabditis elegans
Exon81687   148   III: 2662957-2663104 Caenorhabditis elegans
Exon81690   73   III: 2663153-2663225 Caenorhabditis elegans
Exon81693   327   III: 2663285-2663611 Caenorhabditis elegans
Exon81696   209   III: 2663656-2663864 Caenorhabditis elegans
Exon81699   73   III: 2664953-2665025 Caenorhabditis elegans
Exon81702   99   III: 2665116-2665214 Caenorhabditis elegans
Exon81705   294   III: 2665502-2665795 Caenorhabditis elegans
Exon81707   1015   III: 2666329-2667343 Caenorhabditis elegans
Exon81709   7204   III: 2667510-2674713 Caenorhabditis elegans
Exon81711   78   III: 2674758-2674835 Caenorhabditis elegans
Exon81713   391   III: 2674993-2675383 Caenorhabditis elegans
Exon81716   118   III: 2676547-2676664 Caenorhabditis elegans
Exon81719   149   III: 2677887-2678035 Caenorhabditis elegans
Exon81722   501   III: 2678157-2678657 Caenorhabditis elegans
Exon81725   113   III: 2679030-2679142 Caenorhabditis elegans
Exon81728   97   III: 2679193-2679289 Caenorhabditis elegans
Exon81733   102   III: 2680414-2680515 Caenorhabditis elegans
Exon81737   459   III: 2680653-2681111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H19M22.2a.1 2658083 2681111 1

1 Sequence

Length
13244

1 Sequence Ontology Term

Identifier Name Description
transcript