WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.9.1 Sequence Name  Y71H2AM.9.1
Length (nt)  1903   Chromosome Location  III: 2690160-2698817
Chromosome . Primary Identifier  III Chromosome Location . Start  2690160
Chromosome Location . End  2698817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022174 slc-30A9 Y71H2AM.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.9 Y71H2AM.9 1488   III: 2690568-2690726

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.9.1 2690160 2698817 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81715   567   III: 2690160-2690726 Caenorhabditis elegans
Exon81716   133   III: 2691438-2691570 Caenorhabditis elegans
Exon81717   115   III: 2692410-2692524 Caenorhabditis elegans
Exon81718   94   III: 2693561-2693654 Caenorhabditis elegans
Exon81719   65   III: 2693757-2693821 Caenorhabditis elegans
Exon81720   112   III: 2694730-2694841 Caenorhabditis elegans
Exon81721   125   III: 2694900-2695024 Caenorhabditis elegans
Exon81722   145   III: 2696973-2697117 Caenorhabditis elegans
Exon81723   301   III: 2698139-2698439 Caenorhabditis elegans
Exon81724   199   III: 2698519-2698717 Caenorhabditis elegans
Exon81725   47   III: 2698771-2698817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.9.1 2690160 2698817 -1

1 Sequence

Length
1903

1 Sequence Ontology Term

Identifier Name Description
transcript