WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.7.1 Sequence Name  Y71H2AM.7.1
Length (nt)  1270   Chromosome Location  III: 2726116-2731670
Chromosome . Primary Identifier  III Chromosome Location . Start  2726116
Chromosome Location . End  2731670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022172 cosa-1 Y71H2AM.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.7 Y71H2AM.7 1083   III: 2726166-2726179

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.7.1 2726116 2731670 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81755   64   III: 2726116-2726179 Caenorhabditis elegans
Exon81756   58   III: 2726258-2726315 Caenorhabditis elegans
Exon81757   160   III: 2726429-2726588 Caenorhabditis elegans
Exon81758   133   III: 2726763-2726895 Caenorhabditis elegans
Exon81759   172   III: 2727672-2727843 Caenorhabditis elegans
Exon81760   110   III: 2728553-2728662 Caenorhabditis elegans
Exon81761   207   III: 2729376-2729582 Caenorhabditis elegans
Exon81762   193   III: 2731233-2731425 Caenorhabditis elegans
Exon81764   173   III: 2731498-2731670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.7.1 2726116 2731670 1

1 Sequence

Length
1270

1 Sequence Ontology Term

Identifier Name Description
transcript