WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.15a.1 Sequence Name  Y71H2AM.15a.1
Length (nt)  2628   Chromosome Location  III: 2747120-2752536
Chromosome . Primary Identifier  III Chromosome Location . Start  2747120
Chromosome Location . End  2752536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.15a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022180 gldi-9 Y71H2AM.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.15a Y71H2AM.15a 2511   III: 2747237-2747991

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.15a.1 2747120 2752536 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81819   872   III: 2747120-2747991 Caenorhabditis elegans
Exon81823   131   III: 2748584-2748714 Caenorhabditis elegans
Exon81827   185   III: 2748926-2749110 Caenorhabditis elegans
Exon81831   162   III: 2749160-2749321 Caenorhabditis elegans
Exon81833   121   III: 2750015-2750135 Caenorhabditis elegans
Exon81837   579   III: 2750659-2751237 Caenorhabditis elegans
Exon81841   131   III: 2751503-2751633 Caenorhabditis elegans
Exon81845   82   III: 2751681-2751762 Caenorhabditis elegans
Exon81849   97   III: 2751909-2752005 Caenorhabditis elegans
Exon81853   268   III: 2752269-2752536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.15a.1 2747120 2752536 -1

1 Sequence

Length
2628

1 Sequence Ontology Term

Identifier Name Description
transcript