WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.17.1 Sequence Name  Y71H2AM.17.1
Length (nt)  1671   Chromosome Location  III: 2764010-2768679
Chromosome . Primary Identifier  III Chromosome Location . Start  2764010
Chromosome Location . End  2768679 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022182 swsn-3 Y71H2AM.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.17 Y71H2AM.17 1017   III: 2764650-2764867

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.17.1 2764010 2768679 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81867   858   III: 2764010-2764867 Caenorhabditis elegans
Exon81868   203   III: 2766131-2766333 Caenorhabditis elegans
Exon81869   89   III: 2767153-2767241 Caenorhabditis elegans
Exon81870   192   III: 2768013-2768204 Caenorhabditis elegans
Exon81871   66   III: 2768254-2768319 Caenorhabditis elegans
Exon81872   207   III: 2768365-2768571 Caenorhabditis elegans
Exon81873   56   III: 2768624-2768679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.17.1 2764010 2768679 -1

1 Sequence

Length
1671

1 Sequence Ontology Term

Identifier Name Description
transcript