WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.6a.1 Sequence Name  Y71H2AM.6a.1
Length (nt)  901   Chromosome Location  III: 2781060-2782817
Chromosome . Primary Identifier  III Chromosome Location . Start  2781060
Chromosome Location . End  2782817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022171 Y71H2AM.6 Y71H2AM.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.6a Y71H2AM.6a 834   III: 2781081-2781149

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.6a.1 2781060 2782817 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81882   90   III: 2781060-2781149 Caenorhabditis elegans
Exon81884   89   III: 2781197-2781285 Caenorhabditis elegans
Exon81885   433   III: 2781333-2781765 Caenorhabditis elegans
Exon81887   289   III: 2782529-2782817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.6a.1 2781060 2782817 1

1 Sequence

Length
901

1 Sequence Ontology Term

Identifier Name Description
transcript