WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.5.1 Sequence Name  Y71H2AM.5.1
Length (nt)  443   Chromosome Location  III: 2786202-2786754
Chromosome . Primary Identifier  III Chromosome Location . Start  2786202
Chromosome Location . End  2786754 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022170 cox-6B Y71H2AM.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.5 Y71H2AM.5 366   III: 2786204-2786260

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.5.1 2786202 2786754 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81918   59   III: 2786202-2786260 Caenorhabditis elegans
Exon81919   120   III: 2786308-2786427 Caenorhabditis elegans
Exon81921   264   III: 2786491-2786754 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.5.1 2786202 2786754 1

1 Sequence

Length
443

1 Sequence Ontology Term

Identifier Name Description
transcript