WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.22a.1 Sequence Name  Y71H2AM.22a.1
Length (nt)  1798   Chromosome Location  III: 2793323-2801900
Chromosome . Primary Identifier  III Chromosome Location . Start  2793323
Chromosome Location . End  2801900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.22a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006695 twk-45 Y71H2AM.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.22a Y71H2AM.22a 1527   III: 2793412-2793484

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.22a.1 2793323 2801900 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81925   162   III: 2793323-2793484 Caenorhabditis elegans
Exon81927   164   III: 2794011-2794174 Caenorhabditis elegans
Exon81929   120   III: 2794342-2794461 Caenorhabditis elegans
Exon81931   177   III: 2794504-2794680 Caenorhabditis elegans
Exon81934   86   III: 2794725-2794810 Caenorhabditis elegans
Exon81935   143   III: 2798245-2798387 Caenorhabditis elegans
Exon81936   299   III: 2798977-2799275 Caenorhabditis elegans
Exon81937   123   III: 2800415-2800537 Caenorhabditis elegans
Exon81938   143   III: 2800586-2800728 Caenorhabditis elegans
Exon81939   133   III: 2800775-2800907 Caenorhabditis elegans
Exon81940   50   III: 2801542-2801591 Caenorhabditis elegans
Exon81941   104   III: 2801645-2801748 Caenorhabditis elegans
Exon81942   94   III: 2801807-2801900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.22a.1 2793323 2801900 -1

1 Sequence

Length
1798

1 Sequence Ontology Term

Identifier Name Description
transcript