WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AM.2b.1 Sequence Name  Y71H2AM.2b.1
Length (nt)  1649   Chromosome Location  III: 2819278-2826588
Chromosome . Primary Identifier  III Chromosome Location . Start  2819278
Chromosome Location . End  2826588 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AM.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022167 pipp-4P Y71H2AM.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AM.2b Y71H2AM.2b 774   III: 2819282-2819447

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.2b.1 2819278 2826588 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81957   170   III: 2819278-2819447 Caenorhabditis elegans
Exon81964   225   III: 2821708-2821932 Caenorhabditis elegans
Exon81968   242   III: 2823468-2823709 Caenorhabditis elegans
Exon81969   119   III: 2824545-2824663 Caenorhabditis elegans
Exon81975   893   III: 2825696-2826588 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AM.2b.1 2819278 2826588 1

1 Sequence

Length
1649

1 Sequence Ontology Term

Identifier Name Description
transcript