WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H2AR.3.1 Sequence Name  Y71H2AR.3.1
Length (nt)  686   Chromosome Location  III: 2836639-2838453
Chromosome . Primary Identifier  III Chromosome Location . Start  2836639
Chromosome Location . End  2838453 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2AR.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022190 josd-1 Y71H2AR.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H2AR.3 Y71H2AR.3 522   III: 2836639-2836796

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AR.3.1 2836639 2838453 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81987   158   III: 2836639-2836796 Caenorhabditis elegans
Exon81988   70   III: 2837604-2837673 Caenorhabditis elegans
Exon81989   143   III: 2837740-2837882 Caenorhabditis elegans
Exon81990   315   III: 2838139-2838453 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H2AR.3.1 2836639 2838453 1

1 Sequence

Length
686

1 Sequence Ontology Term

Identifier Name Description
transcript