WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56F11.4a.1 Sequence Name  F56F11.4a.1
Length (nt)  1351   Chromosome Location  III: 2858709-2865500
Chromosome . Primary Identifier  III Chromosome Location . Start  2858709
Chromosome Location . End  2865500 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56F11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018991 F56F11.4 F56F11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56F11.4a F56F11.4a 1236   III: 2858710-2858820

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56F11.4a.1 2858709 2865500 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82021   112   III: 2858709-2858820 Caenorhabditis elegans
Exon82022   330   III: 2860309-2860638 Caenorhabditis elegans
Exon82025   264   III: 2861895-2862158 Caenorhabditis elegans
Exon82028   180   III: 2863246-2863425 Caenorhabditis elegans
Exon82032   465   III: 2865036-2865500 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56F11.4a.1 2858709 2865500 1

1 Sequence

Length
1351

1 Sequence Ontology Term

Identifier Name Description
transcript