WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10F2.6.1 Sequence Name  R10F2.6.1
Length (nt)  3636   Chromosome Location  III: 2937040-2944095
Chromosome . Primary Identifier  III Chromosome Location . Start  2937040
Chromosome Location . End  2944095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10F2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019997 R10F2.6 R10F2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10F2.6 R10F2.6 3486   III: 2937103-2937687

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10F2.6.1 2937040 2944095 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82145   648   III: 2937040-2937687 Caenorhabditis elegans
Exon82146   337   III: 2938198-2938534 Caenorhabditis elegans
Exon82147   160   III: 2938580-2938739 Caenorhabditis elegans
Exon82148   402   III: 2938782-2939183 Caenorhabditis elegans
Exon82149   208   III: 2940013-2940220 Caenorhabditis elegans
Exon82150   179   III: 2940285-2940463 Caenorhabditis elegans
Exon82151   589   III: 2940767-2941355 Caenorhabditis elegans
Exon82152   167   III: 2941640-2941806 Caenorhabditis elegans
Exon82153   234   III: 2942242-2942475 Caenorhabditis elegans
Exon82154   381   III: 2942766-2943146 Caenorhabditis elegans
Exon82155   207   III: 2943474-2943680 Caenorhabditis elegans
Exon82156   124   III: 2943972-2944095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10F2.6.1 2937040 2944095 -1

1 Sequence

Length
3636

1 Sequence Ontology Term

Identifier Name Description
transcript