WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06I04.6b.1 Sequence Name  H06I04.6b.1
Length (nt)  1046   Chromosome Location  III: 3061192-3064341
Chromosome . Primary Identifier  III Chromosome Location . Start  3061192
Chromosome Location . End  3064341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06I04.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019170 H06I04.6 H06I04.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06I04.6b H06I04.6b 888   III: 3061767-3061937

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06I04.6b.1 3061192 3064341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82318   117   III: 3061192-3061308 Caenorhabditis elegans
Exon82321   193   III: 3061745-3061937 Caenorhabditis elegans
Exon82329   121   III: 3062344-3062464 Caenorhabditis elegans
Exon82334   132   III: 3062754-3062885 Caenorhabditis elegans
Exon82339   102   III: 3063008-3063109 Caenorhabditis elegans
Exon82342   381   III: 3063961-3064341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06I04.6b.1 3061192 3064341 -1

1 Sequence

Length
1046

1 Sequence Ontology Term

Identifier Name Description
transcript