WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06I04.3a.1 Sequence Name  H06I04.3a.1
Length (nt)  2751   Chromosome Location  III: 3070523-3085268
Chromosome . Primary Identifier  III Chromosome Location . Start  3070523
Chromosome Location . End  3085268 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06I04.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019168 H06I04.3 H06I04.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06I04.3a H06I04.3a 2502   III: 3070552-3070618

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06I04.3a.1 3070523 3085268 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82370   96   III: 3070523-3070618 Caenorhabditis elegans
Exon82373   153   III: 3070678-3070830 Caenorhabditis elegans
Exon82376   110   III: 3070897-3071006 Caenorhabditis elegans
Exon82379   198   III: 3071999-3072196 Caenorhabditis elegans
Exon82382   404   III: 3073597-3074000 Caenorhabditis elegans
Exon82386   386   III: 3076305-3076690 Caenorhabditis elegans
Exon82389   357   III: 3079530-3079886 Caenorhabditis elegans
Exon82392   472   III: 3081164-3081635 Caenorhabditis elegans
Exon82395   210   III: 3083494-3083703 Caenorhabditis elegans
Exon82397   365   III: 3084904-3085268 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06I04.3a.1 3070523 3085268 1

1 Sequence

Length
2751

1 Sequence Ontology Term

Identifier Name Description
transcript