WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53G8B.4b Sequence Name  Y53G8B.4b
Length (nt)  1137   Chromosome Location  III: 3112852-3113019
Chromosome . Primary Identifier  III Chromosome Location . Start  3112852
Chromosome Location . End  3113019
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8B.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42037 NIPA-1, isoform b 40.9 378 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00057323

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53G8B.4b 3112852 3113019 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021820 nipa-1 Y53G8B.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53G8B.4b 3112852 3113019 -1
CDS:Y53G8B.4b 3113771 3114043 -1
CDS:Y53G8B.4b 3114678 3115002 -1
CDS:Y53G8B.4b 3115543 3115633 -1
CDS:Y53G8B.4b 3116150 3116341 -1
CDS:Y53G8B.4b 3116918 3117005 -1

1 Sequence

Length
1137

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53G8B.4b.1 Y53G8B.4b.1 1555   III: 3112434-3117005