WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R148.5b.1 Sequence Name  R148.5b.1
Length (nt)  1518   Chromosome Location  III: 3166285-3170584
Chromosome . Primary Identifier  III Chromosome Location . Start  3166285
Chromosome Location . End  3170584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R148.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020104 R148.5 R148.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R148.5b R148.5b 1518   III: 3166285-3166433

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R148.5b.1 3166285 3170584 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82503   149   III: 3166285-3166433 Caenorhabditis elegans
Exon82507   365   III: 3166937-3167301 Caenorhabditis elegans
Exon82510   213   III: 3168275-3168487 Caenorhabditis elegans
Exon82513   679   III: 3169334-3170012 Caenorhabditis elegans
Exon82516   112   III: 3170473-3170584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R148.5b.1 3166285 3170584 1

1 Sequence

Length
1518

1 Sequence Ontology Term

Identifier Name Description
transcript