WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R148.7.1 Sequence Name  R148.7.1
Length (nt)  819   Chromosome Location  III: 3195557-3198407
Chromosome . Primary Identifier  III Chromosome Location . Start  3195557
Chromosome Location . End  3198407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R148.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020105 R148.7 R148.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R148.7 R148.7 687   III: 3195588-3195731

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R148.7.1 3195557 3198407 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82572   175   III: 3195557-3195731 Caenorhabditis elegans
Exon82573   93   III: 3195773-3195865 Caenorhabditis elegans
Exon82574   219   III: 3196201-3196419 Caenorhabditis elegans
Exon82575   110   III: 3196815-3196924 Caenorhabditis elegans
Exon82576   77   III: 3196968-3197044 Caenorhabditis elegans
Exon82577   29   III: 3197100-3197128 Caenorhabditis elegans
Exon82578   116   III: 3198292-3198407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R148.7.1 3195557 3198407 -1

1 Sequence

Length
819

1 Sequence Ontology Term

Identifier Name Description
transcript