WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H09G03.2a.1 Sequence Name  H09G03.2a.1
Length (nt)  2613   Chromosome Location  III: 3200795-3208896
Chromosome . Primary Identifier  III Chromosome Location . Start  3200795
Chromosome Location . End  3208896 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H09G03.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001494 frm-8 H09G03.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H09G03.2a H09G03.2a 2445   III: 3200951-3201044

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H09G03.2a.1 3200795 3208896 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82581   250   III: 3200795-3201044 Caenorhabditis elegans
Exon82584   279   III: 3201855-3202133 Caenorhabditis elegans
Exon82586   449   III: 3203048-3203496 Caenorhabditis elegans
Exon82589   362   III: 3203919-3204280 Caenorhabditis elegans
Exon82592   170   III: 3204725-3204894 Caenorhabditis elegans
Exon82595   266   III: 3205518-3205783 Caenorhabditis elegans
Exon82598   231   III: 3206599-3206829 Caenorhabditis elegans
Exon82601   224   III: 3207052-3207275 Caenorhabditis elegans
Exon82604   152   III: 3207736-3207887 Caenorhabditis elegans
Exon82607   117   III: 3208108-3208224 Caenorhabditis elegans
Exon82611   113   III: 3208784-3208896 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H09G03.2a.1 3200795 3208896 -1

1 Sequence

Length
2613

1 Sequence Ontology Term

Identifier Name Description
transcript