WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H09G03.2b.1 Sequence Name  H09G03.2b.1
Length (nt)  2717   Chromosome Location  III: 3200803-3219150
Chromosome . Primary Identifier  III Chromosome Location . Start  3200803
Chromosome Location . End  3219150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H09G03.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001494 frm-8 H09G03.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H09G03.2b H09G03.2b 2562   III: 3200951-3201044

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H09G03.2b.1 3200803 3219150 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82582   242   III: 3200803-3201044 Caenorhabditis elegans
Exon82585   279   III: 3201855-3202133 Caenorhabditis elegans
Exon82587   449   III: 3203048-3203496 Caenorhabditis elegans
Exon82590   362   III: 3203919-3204280 Caenorhabditis elegans
Exon82593   170   III: 3204725-3204894 Caenorhabditis elegans
Exon82596   266   III: 3205518-3205783 Caenorhabditis elegans
Exon82599   231   III: 3206599-3206829 Caenorhabditis elegans
Exon82602   224   III: 3207052-3207275 Caenorhabditis elegans
Exon82605   152   III: 3207736-3207887 Caenorhabditis elegans
Exon82608   117   III: 3208108-3208224 Caenorhabditis elegans
Exon82612   103   III: 3216283-3216385 Caenorhabditis elegans
Exon82613   122   III: 3219029-3219150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H09G03.2b.1 3200803 3219150 -1

1 Sequence

Length
2717

1 Sequence Ontology Term

Identifier Name Description
transcript