WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53G8AL.1 Sequence Name  Y53G8AL.1
Length (nt)  3348   Chromosome Location  III: 3233102-3233200
Chromosome . Primary Identifier  III Chromosome Location . Start  3233102
Chromosome Location . End  3233200
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AL.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40218 Y53G8AL.1 125.3 1115 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00057302
WBRNAi00037433

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AL.1 3233102 3233200 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021799 Y53G8AL.1 Y53G8AL.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AL.1 3233102 3233200 1
CDS:Y53G8AL.1 3233534 3233650 1
CDS:Y53G8AL.1 3233718 3233906 1
CDS:Y53G8AL.1 3234235 3234450 1
CDS:Y53G8AL.1 3234817 3235143 1
CDS:Y53G8AL.1 3235737 3235964 1
CDS:Y53G8AL.1 3236984 3237067 1
CDS:Y53G8AL.1 3237200 3237436 1
CDS:Y53G8AL.1 3237801 3238205 1
CDS:Y53G8AL.1 3238937 3240274 1
CDS:Y53G8AL.1 3241156 3241263 1

1 Sequence

Length
3348

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53G8AL.1.1 Y53G8AL.1.1 3460   III: 3233102-3241375