WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53G8AM.6.1 Sequence Name  Y53G8AM.6.1
Length (nt)  366   Chromosome Location  III: 3259331-3259791
Chromosome . Primary Identifier  III Chromosome Location . Start  3259331
Chromosome Location . End  3259791 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AM.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021806 Y53G8AM.6 Y53G8AM.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53G8AM.6 Y53G8AM.6 366   III: 3259331-3259424

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AM.6.1 3259331 3259791 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82668   94   III: 3259331-3259424 Caenorhabditis elegans
Exon82669   260   III: 3259474-3259733 Caenorhabditis elegans
Exon82670   12   III: 3259780-3259791 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AM.6.1 3259331 3259791 -1

1 Sequence

Length
366

1 Sequence Ontology Term

Identifier Name Description
transcript