WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53G8AM.8a Sequence Name  Y53G8AM.8a
Length (nt)  2565   Chromosome Location  III: 3267307-3267339
Chromosome . Primary Identifier  III Chromosome Location . Start  3267307
Chromosome Location . End  3267339
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AM.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54280 Y53G8AM.8, isoform a 94.5 854 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00057310
WBRNAi00020959
WBRNAi00020960
WBRNAi00020961
WBRNAi00037434
WBRNAi00070836
WBRNAi00070837

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AM.8a 3267307 3267339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021808 Y53G8AM.8 Y53G8AM.8 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AM.8a 3267307 3267339 -1
CDS:Y53G8AM.8a 3267789 3268378 -1
CDS:Y53G8AM.8a 3269104 3269386 -1
CDS:Y53G8AM.8a 3270201 3270350 -1
CDS:Y53G8AM.8a 3273458 3273585 -1
CDS:Y53G8AM.8a 3274176 3275259 -1
CDS:Y53G8AM.8a 3278302 3278475 -1
CDS:Y53G8AM.8a 3278582 3278704 -1

1 Sequence

Length
2565

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53G8AM.8a.1 Y53G8AM.8a.1 2692   III: 3267186-3278710