WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53G8AR.6.1 Sequence Name  Y53G8AR.6.1
Length (nt)  1429   Chromosome Location  III: 3294743-3297248
Chromosome . Primary Identifier  III Chromosome Location . Start  3294743
Chromosome Location . End  3297248 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AR.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021813 Y53G8AR.6 Y53G8AR.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53G8AR.6 Y53G8AR.6 762   III: 3294752-3294883

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AR.6.1 3294743 3297248 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82720   141   III: 3294743-3294883 Caenorhabditis elegans
Exon82721   326   III: 3295006-3295331 Caenorhabditis elegans
Exon82722   962   III: 3296287-3297248 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AR.6.1 3294743 3297248 1

1 Sequence

Length
1429

1 Sequence Ontology Term

Identifier Name Description
transcript