WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53G8AR.3b Sequence Name  Y53G8AR.3b
Length (nt)  765   Chromosome Location  III: 3311597-3311717
Chromosome . Primary Identifier  III Chromosome Location . Start  3311597
Chromosome Location . End  3311717
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AR.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46416 RAL-1, isoform b 29.1 254 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00078603
WBRNAi00085580
WBRNAi00057313
WBRNAi00020954
WBRNAi00037442
WBRNAi00078528
WBRNAi00108135

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AR.3b 3311597 3311717 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021811 ral-1 Y53G8AR.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AR.3b 3311597 3311717 1
CDS:Y53G8AR.3b 3312566 3312624 1
CDS:Y53G8AR.3b 3312700 3312765 1
CDS:Y53G8AR.3b 3313774 3313895 1
CDS:Y53G8AR.3b 3314201 3314287 1
CDS:Y53G8AR.3b 3315897 3316074 1
CDS:Y53G8AR.3b 3317371 3317502 1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53G8AR.3b.1 Y53G8AR.3b.1 1266   III: 3311310-3317716