WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53G8AR.3a Sequence Name  Y53G8AR.3a
Length (nt)  642   Chromosome Location  III: 3312568-3312624
Chromosome . Primary Identifier  III Chromosome Location . Start  3312568
Chromosome Location . End  3312624
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AR.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25424 RAL-1, isoform a 24.0 213 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00078603
WBRNAi00085580
WBRNAi00057313
WBRNAi00020954
WBRNAi00037442
WBRNAi00078528
WBRNAi00108135

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AR.3a 3312568 3312624 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021811 ral-1 Y53G8AR.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53G8AR.3a 3312568 3312624 1
CDS:Y53G8AR.3a 3312700 3312765 1
CDS:Y53G8AR.3a 3313774 3313895 1
CDS:Y53G8AR.3a 3314201 3314287 1
CDS:Y53G8AR.3a 3315897 3316074 1
CDS:Y53G8AR.3a 3317371 3317502 1

1 Sequence

Length
642

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53G8AR.3a.1 Y53G8AR.3a.1 855   III: 3312566-3317713